• Syllabus

    Programming Assignments:
  • Program 1:
  • Program 2:

    Homework
  • HW 1 due Sept 7.
  • HW 2 due Due Sept. 28. (note that this hw has been modified).
  • HW 3 due Due October 5 (note that this hw has been modified).
  • HW 4 due Due Oct. 21 (this is a program).
  • HW 5 due Due Oct. 28 (note that this hw has been modified on 9/28).
  • HW 6 due
  • HW 7 due
  • HW 8 due Due: November 4
  • Hw 9 due

    Reading Assigments: Chapter 1: Read by 9/2 Chapter 2: Read by 9/16 Chapter 3: Read by 9/23

  • Term paper Due: Dec 2 5pm . Students with last names from "" will present on Tues Nov 23 those with last names from "" will present on Tues Nov 30, and those with last names "" will present on Thursday Dec 2. Anyone with a conflict should discuss with instructor.

  • Suggested term paper topics: String matching algorithms, computing with DNA, Molecular Structure or Gene Prediction, Phylogenetic Trees, DNA databases, Pattern matching, clustering, hidden markov models, protein folding and structure, intractable problems in computational biology and approximation algorithms, practical applications of bioinformatics.
  • Course Materials: Part 1 Part 2 Part 3 Part 4 Part 5 Part 6 Part 7 Part 8

  • Links

    Nice TSP Page